EMMAWiki/TermsAndConcepts/ForDevelopers/ProgrammingLanguages - Revision history

Alu: /* TermsAndConcepts: Programming Languages */

2011-10-26T12:22:24Z

TermsAndConcepts: Programming Languages

← Older revision		Revision as of 14:22, 26 October 2011
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	__NOTOC__		__NOTOC__
	= [[TermsAndConcepts]]: Programming Languages =		= TermsAndConcepts: Programming Languages =

	EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an interpreted language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, database accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.		EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an interpreted language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, database accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.

Alu: /* TermsAndConcepts: Programming Languages */

2011-10-26T12:21:53Z

TermsAndConcepts: Programming Languages

← Older revision		Revision as of 14:21, 26 October 2011
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	The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.		The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.

	To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript ~~:-(~~ . The JavaScript implementations of many browsers differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.		To provide interactive functionality with a web-browser we unfortunately have to use JavaScript. The JavaScript implementations of many browsers differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.

	By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interactions to its limit. We also use some Java for doing [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]].		By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interactions to its limit. We also use some Java for doing [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]].

Admin: 9 revisions

2011-10-26T06:16:30Z

9 revisions

← Older revision	Revision as of 08:16, 26 October 2011
(No difference)

imported>VirginieMittard at 12:52, 25 August 2005

2005-08-25T12:52:36Z

← Older revision		Revision as of 14:52, 25 August 2005
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	By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interactions to its limit. We also use some Java for doing [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]].		By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interactions to its limit. We also use some Java for doing [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]].

	Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional programming language for transforming XML documents. It is used for CodeGeneration of the O2DBI backend.		Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional programming language for transforming XML documents. It is used for [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]] of the O2DBI backend.

	= Other languages =		= Other languages =

imported>VirginieMittard at 12:51, 25 August 2005

2005-08-25T12:51:48Z

← Older revision		Revision as of 14:51, 25 August 2005
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	= [[TermsAndConcepts]]: Programming Languages =		= [[TermsAndConcepts]]: Programming Languages =

	EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an ~~iterpreted~~ language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, ~~databse~~ accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.		EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an interpreted language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, database accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.

	The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.		The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.

	To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many ~~browser~~ differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.		To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browsers differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.

	By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of ~~interaction~~ to its limit. We also use some Java for doing CodeGeneration.		By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interactions to its limit. We also use some Java for doing [[EMMAWiki/TermsAndConcepts/ForDevelopers/CodeGeneration\| CodeGeneration]].

	Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully ~~functional~~ functional programming language for transforming XML documents. It is used for CodeGeneration of the O2DBI backend.		Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional programming language for transforming XML documents. It is used for CodeGeneration of the O2DBI backend.

	= Other languages =		= Other languages =

imported>VirginieMittard at 13:09, 23 August 2005

2005-08-23T13:09:20Z

← Older revision		Revision as of 15:09, 23 August 2005
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	To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.		To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.

	By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interaction to its limit. We also use some Java for doing [[CodeGeneration]].		By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interaction to its limit. We also use some Java for doing CodeGeneration.

	Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional functional programming language for transforming XML documents. It is used for [[CodeGeneration]] of the O2DBI backend.		Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional functional programming language for transforming XML documents. It is used for CodeGeneration of the O2DBI backend.

	= Other languages =		= Other languages =

imported>MichaelDondrup at 13:22, 21 April 2005

2005-04-21T13:22:12Z

← Older revision		Revision as of 15:22, 21 April 2005
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	= Other languages =		= Other languages =

	These are ~~document~~ languages which are used in EMMA		These are non-programming languages which are used in EMMA

	* HTML - guess why (BTW: we are actually using XHTML which is the XML version of HTML)		* HTML - guess why (BTW: we are actually using XHTML which is the XML version of HTML)
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	* CSS 2.0 - For creating our stylish web-interface		* CSS 2.0 - For creating our stylish web-interface
	* DTD - to define and validate XML-documents		* DTD - to define and validate XML-documents
			* SQL - The database scheme which is created by O2DBI is defined in SQL. Also some highly optimized queries are written in raw SQL for speed.

imported>MichaelDondrup at 13:15, 21 April 2005

2005-04-21T13:15:22Z

← Older revision		Revision as of 15:15, 21 April 2005
Line 7:		Line 7:

	To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.		To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.

			By use of fancy [http://www.java.sun.com Java] applets we try to raise the level of interaction to its limit. We also use some Java for doing [[CodeGeneration]].

			Another interesting language is [http://www.w3.org/TR/xslt XSLT] which is in fact a fully functional functional programming language for transforming XML documents. It is used for [[CodeGeneration]] of the O2DBI backend.

			= Other languages =

			These are document languages which are used in EMMA

			* HTML - guess why (BTW: we are actually using XHTML which is the XML version of HTML)
			* XML - MAGE-ML is an example. Also O2DBI uses XML documents for defining the class structure
			* CSS 2.0 - For creating our stylish web-interface
			* DTD - to define and validate XML-documents

imported>MichaelDondrup at 12:59, 21 April 2005

2005-04-21T12:59:26Z

← Older revision		Revision as of 14:59, 21 April 2005
Line 6:		Line 6:
	The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.		The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.

	To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main ~~couse~~ why EMMA does not work with the AnyBrowser.		To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main cause why EMMA does not work with the AnyBrowser.

imported>MichaelDondrup at 12:59, 21 April 2005

2005-04-21T12:59:07Z

← Older revision		Revision as of 14:59, 21 April 2005
Line 3:		Line 3:

	EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an iterpreted language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, databse accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.		EMMA is mainly written in object-oriented [http://www.perl.org/ Perl]. Perl is an iterpreted language which is commonly used for building web-applications. From our point of view the major strengths of perl are string processing, databse accessibility and web-applications, but it lacks structured data-types and number crunching capabilities. EMMA relies on numerous third party perl modules to complement this.

			The analysis functions are implemented using the [http://www.r-project.org statistical environment R]. R has excellent support for many statistical methods and the [http://www.bioconductor.org/ Bioconductor project] provides loads of functionality for microarray data analysis within R.

			To provide interactive functionality with a web-browser we unfortunately have to use :( JavaScript :-( . The JavaScript implementations of many browser differ and this is a real mess. JavaScript is the main couse why EMMA does not work with the AnyBrowser.