https://wiki.cebitec.uni-bielefeld.de/brf-software/index.php?action=history&feed=atom&title=EMMAWiki%2FTermsAndConcepts%2FForUsers%2FAnalysis_Pipeline 2026-04-21T19:57:38Z Revision history for this page on the wiki MediaWiki 1.39.7 https://wiki.cebitec.uni-bielefeld.de/brf-software/index.php?title=EMMAWiki/TermsAndConcepts/ForUsers/Analysis_Pipeline&diff=2262&oldid=prev 2011-10-26T06:17:24Z

<p>2 revisions</p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <tr class="diff-title" lang="en"> <td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 08:17, 26 October 2011</td> </tr><tr><td colspan="2" class="diff-notice" lang="en"><div class="mw-diff-empty">(No difference)</div> </td></tr></table>

Admin https://wiki.cebitec.uni-bielefeld.de/brf-software/index.php?title=EMMAWiki/TermsAndConcepts/ForUsers/Analysis_Pipeline&diff=2261&oldid=prev 2005-08-25T12:18:16Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 14:18, 25 August 2005</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l8">Line 8:</td> <td colspan="2" class="diff-lineno">Line 8:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** Clustering (Heatmap e.g.)</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** Clustering (Heatmap e.g.)</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">Afterwards you will </del>have the possibility to configure your requested functions or <del style="font-weight: bold; text-decoration: none;">just let them work with their default parameters</del>.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">You can just let them work with their default parameters. You may also </ins>have the possibility to configure your requested functions <ins style="font-weight: bold; text-decoration: none;">and/</ins>or <ins style="font-weight: bold; text-decoration: none;">create a new pipeline which better suits your data if you are the chief of the project</ins>.</div></td></tr> </table>

imported>VirginieMittard https://wiki.cebitec.uni-bielefeld.de/brf-software/index.php?title=EMMAWiki/TermsAndConcepts/ForUsers/Analysis_Pipeline&diff=2260&oldid=prev 2005-08-24T10:04:08Z

<p></p> <p><b>New page</b></p><div>__NOTOC__<br /> == Analysis Pipeline ==<br /> <br /> * Once you have created the experiment and imported your data, you will need to analyze the arrays as you have only raw data.You can choose one of the several available analysis pipelines which often contain the following analysis methods:<br /> ** Normalization preview<br /> ** Normalization (default = lowess)<br /> ** Statistical or significance tests<br /> ** Clustering (Heatmap e.g.)<br /> <br /> Afterwards you will have the possibility to configure your requested functions or just let them work with their default parameters.</div>

imported>VirginieMittard