GPMSWiki/DeveloperDocumentation/SettingUpANewProject - Revision history

Admin: 14 revisions

2011-10-26T06:15:39Z

14 revisions

← Older revision	Revision as of 08:15, 26 October 2011
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imported>JomunaChoudhuri at 15:41, 24 August 2005

2005-08-24T15:41:27Z

← Older revision		Revision as of 17:41, 24 August 2005
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	* The Database Management System Type (DBMS type) (in most cases MySQL-Version).		* The Database Management System Type (DBMS type) (in most cases MySQL-Version).

	You can find more information about the different parameters on the [[../~~DesignDocumentation\|~~DesignDocumentation]] page.		You can find more information about the different parameters on the [[../DesignDocumentation]] page.

	For additional information on how to request a new Project for the CeBiTec GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].		For additional information on how to request a new Project for the CeBiTec GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

imported>JomunaChoudhuri at 15:39, 24 August 2005

2005-08-24T15:39:52Z

← Older revision		Revision as of 17:39, 24 August 2005
Line 18:		Line 18:
	* The Database Management System Type (DBMS type) (in most cases MySQL-Version).		* The Database Management System Type (DBMS type) (in most cases MySQL-Version).

	You can find more information about the different parameters on the [~~http://www.cebitec~~.~~uni-bielefeld~~.de/~~groups/brf/software/wiki/GPMSWiki_2fCoreDocumentation_2fDesign_20goals_20and_20specification~~ DesignDocumentation] page.		You can find more information about the different parameters on the [[../DesignDocumentation\|DesignDocumentation]] page.

	For additional information on how to request a new Project for the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].		For additional information on how to request a new Project for the CeBiTec GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

	For more information you can also execute the commands <code><nowiki>gpms add_project</nowiki></code> and <code><nowiki>gpms add_db</nowiki></code>. See below for a screenshot of the program's output:		For more information you can also execute the commands <code><nowiki>gpms add_project</nowiki></code> and <code><nowiki>gpms add_db</nowiki></code>. See below for a screenshot of the program's output:

imported>LutzKrause at 16:44, 18 April 2005

2005-04-18T16:44:06Z

← Older revision		Revision as of 18:44, 18 April 2005
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	* A database DataSource_Type. The DataSource_Type determines the specific type of a datasource. e.g. GenDB, EMMA or ProDB.		* A database DataSource_Type. The DataSource_Type determines the specific type of a datasource. e.g. GenDB, EMMA or ProDB.
	* The Database Management System Type (DBMS type) (in most cases MySQL-Version).		* The Database Management System Type (DBMS type) (in most cases MySQL-Version).

			You can find more information about the different parameters on the [http://www.cebitec.uni-bielefeld.de/groups/brf/software/wiki/GPMSWiki_2fCoreDocumentation_2fDesign_20goals_20and_20specification DesignDocumentation] page.

			For additional information on how to request a new Project for the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

	For more information you can also execute the commands <code><nowiki>gpms add_project</nowiki></code> and <code><nowiki>gpms add_db</nowiki></code>. See below for a screenshot of the program's output:		For more information you can also execute the commands <code><nowiki>gpms add_project</nowiki></code> and <code><nowiki>gpms add_db</nowiki></code>. See below for a screenshot of the program's output:
Line 67:		Line 71:
	Nothing to be done: Neither database nor project name given!		Nothing to be done: Neither database nor project name given!
	</nowiki></pre>		</nowiki></pre>


	For additional information on how to request a new Project for the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

imported>LutzKrause at 13:24, 18 April 2005

2005-04-18T13:24:10Z

← Older revision		Revision as of 15:24, 18 April 2005
Line 69:		Line 69:


	For additional information on how to request a Project at the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].		For additional information on how to request a new Project for the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

imported>LutzKrause at 13:23, 18 April 2005

2005-04-18T13:23:25Z

← Older revision		Revision as of 15:23, 18 April 2005
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	Nothing to be done: Neither database nor project name given!		Nothing to be done: Neither database nor project name given!
	</nowiki></pre>		</nowiki></pre>


			For additional information on how to request a Project at the [[CeBiTec]] GPMS installation see [http://www.cebitec.uni-bielefeld.de/groups/brf/internal/GPMSWiki/DeveloperDocumentation/RequestingANewProject InternalGPMSWiki].

imported>LutzKrause at 13:19, 18 April 2005

2005-04-18T13:19:59Z

@@ Line 2: / Line 2: @@
 = Setting up a new project =
-If you would like to set up a new GPMS controlled project, you will need to send an email to the Lutz, Burkhard and Alex '''[maybe better some gpms-project-request mailing list?]''' with a list of parameters:
+If you would like to set up a new GPMS controlled project, you need to specify the following parameters:
 * A project name.
@@ Line 67: / Line 67: @@
 Nothing to be done: Neither database nor project name given!
 </nowiki></pre>

imported>LutzKrause at 17:02, 30 March 2005

2005-03-30T17:02:32Z

← Older revision		Revision as of 19:02, 30 March 2005
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	* A project class.		* A project class.
	* A project description.		* A project description.
			* The projects affiliation
	* A list of developer that should be granted access right to this project and one project Chief which maintains the project members.		* A list of developer that should be granted access right to this project and one project Chief which maintains the project members.
	* You have to clarify if your project is a meta project. Meta projects do not own a database, but group several projects into on single project.		* You have to clarify if your project is a meta project. Meta projects do not own a database, but group several projects into on single project.
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	<pre><nowiki>		<pre><nowiki>
	~~cab~~:~>/vol/gpms-intern/bin/gpms add_project		mowgli:/vol/gpms-intern/bin>gpms add_project
	add_project - add a new Project to project management database		add_project - add a new Project to project management database

	usage: add_project -p <name> -c <project_class> -d <description>		usage: add_project -p <name> -c <project_class> -d <description> -a <affiliations>
	[-v -m]		[-v -m]

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	-c <project_class> the Projects Project_Class		-c <project_class> the Projects Project_Class
	-d <description> Project description		-d <description> Project description
			-a <affiliations> the projects affiliations
	-m project is a META project		-m project is a META project
	-v verbose		-v verbose
	-h print this help message		-h print this help message

	example: add_project -p gendb_test -c GENDB -d "The GenDB DB"		example: add_project -p gendb_test -c GENDB -d "The GenDB DB" -a "genomic cebitec "

	~~Nothing to be done: No project class name given!~~
	</nowiki></pre>		</nowiki></pre>

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	This list of parameters depends a bit on what kind of project you would like to set up. If your project is belonging to one of the systems EMMA, GenDB, ProDB), you can simple state the appropriate project class and DataSource_Type:		This list of parameters depends a bit on what kind of project you would like to set up. If your project is belonging to one of the systems EMMA, GenDB, ProDB, you can simple state the appropriate project class and DataSource_Type:

	{\| border="1" cellpadding="2" cellspacing="0"		{\| border="1" cellpadding="2" cellspacing="0"
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	\| METAXP		\| METAXP
	\| METAXP		\| METAXP
			\|}

			Currently available affiliations are:

			{\| border="1" cellpadding="2" cellspacing="0"
			\| ALL
			\|-
			\| BACDIVERS
			\|-
			\| BAS
			\|-
			\| CeBiTec
			\|-
			\| del_me
			\|-
			\| demo
			\|-
			\| extern
			\|-
			\| Genetik
			\|-
			\| Genomik
			\|-
			\| GLIP
			\|-
			\| Goettingen
			\|-
			\| intern
			\|-
			\| Limor
			\|-
			\| Litmor
			\|-
			\| MGE
			\|-
			\| MolMyk
			\|-
			\| PathoGenomik
	\|}		\|}

	If unsure, have a chat with Lutz, the main GPMS developer, about your project.		If unsure, have a chat with Lutz, the main GPMS developer, about your project.

imported>LutzKrause at 13:55, 10 January 2005

2005-01-10T13:55:14Z

← Older revision		Revision as of 15:55, 10 January 2005
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	\| '''System Name'''		\| '''System Name'''
	\| '''Project Class'''		\| '''Project Class'''
	\|
	\| '''DataSource_Type'''		\| '''DataSource_Type'''
	\|-		\|-
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	\| PRODB		\| PRODB
	\| PRODB		\| PRODB
			\|-
			\| METAXP
			\| METAXP
			\| METAXP
	\|}		\|}

	If unsure, have a chat with Lutz, the main GPMS developer, about your project.		If unsure, have a chat with Lutz, the main GPMS developer, about your project.

imported>LutzKrause at 13:53, 10 January 2005

2005-01-10T13:53:34Z

← Older revision		Revision as of 15:53, 10 January 2005
Line 7:		Line 7:
	* A project class.		* A project class.
	* A project description.		* A project description.
	* A list of developer that should be granted access right to this project~~. One of these developers needs to be denoted as head developer (or "chief") of this~~ project.		* A list of developer that should be granted access right to this project and one project Chief which maintains the project members.
	* You have to clarify if your project is a meta project. Meta projects do not own a database, but ~~access the~~ project ~~classes' database only~~.		* You have to clarify if your project is a meta project. Meta projects do not own a database, but group several projects into on single project.

	If project has its own database, you will need to provide this additional information as well:		If the project has its own database, you will need to provide this additional information as well:

	* A database name. This can be the same as the project's name, but does not necessarily has to be. It can, for example, be something like [project name]_test.		* A database name. This can be the same as the project's name, but does not necessarily has to be. It can, for example, be something like [project name]_test.
	* A database description. In many cases this will start with something like "database backend for project X", but should be more specific about the purpose, for example, "initial test database, don't try to make sense of the data!" or "production database for all Caenorhabditis elegans data".		* A database description. In many cases this will start with something like "database backend for project X", but should be more specific about the purpose, for example, "initial test database, don't try to make sense of the data!" or "production database for all Caenorhabditis elegans data".
	* A database DataSource_Type. ~~It determine~~ the specific type of a datasource. e.g. GenDB, EMMA or ProDB.		* A database DataSource_Type. The DataSource_Type determines the specific type of a datasource. e.g. GenDB, EMMA or ProDB.
	* The Database Management System Type (DBMS type) (in most cases MySQL-Version).		* The Database Management System Type (DBMS type) (in most cases MySQL-Version).

Line 69:		Line 69:


	This list of parameters depends a bit on what kind of project you would like to set up. If your project is belonging to one of the ~~larger projects (e.g.~~ EMMA, GenDB, ProDB), you can simple state the appropriate project class:		This list of parameters depends a bit on what kind of project you would like to set up. If your project is belonging to one of the systems EMMA, GenDB, ProDB), you can simple state the appropriate project class and DataSource_Type:

	{\| border="1" cellpadding="2" cellspacing="0"		{\| border="1" cellpadding="2" cellspacing="0"
	\| '''~~Database~~ Name'''		\| '''System Name'''
	\| '''Project Class'''		\| '''Project Class'''
			\|
			\| '''DataSource_Type'''
	\|-		\|-
	\| EMMA		\| EMMA
	\| EMMA		\| EMMA
			\| EMMA
	\|-		\|-
	\| GenDB		\| GenDB
	\| GENDB		\| GENDB-2.2
			\| GENDB
	\|-		\|-
	\| ProDB		\| ProDB
	\| PRODB		\| PRODB
			\| PRODB
	\|}		\|}

	If unsure, have a chat with Lutz, the main GPMS developer, about your project.		If unsure, have a chat with Lutz, the main GPMS developer, about your project.