HowToBuildR ForSolaris: Difference between revisions
Jump to navigation
Jump to search
imported>MichaelDondrup No edit summary |
imported>MichaelDondrup No edit summary |
||
| Line 1: | Line 1: | ||
__NOTOC__ | __NOTOC__ | ||
= Tips how to build R and Bioconductor using the [[SunPro]] 12 Compiler Suite = | |||
== Synopsis == | |||
This pages gives some hints on how R and Boioconductor can be compiled using the Sun Compilers. This works at the [[CeBiTec]]. If you try that somwhere else your milage may vary. Most tips are given as shell commands. | |||
== Preconditions == | |||
Checking the versions of the compilers, yours should be same or higher: | |||
<pre><nowiki> | |||
dizzy~> which cc | |||
/opt/SUNWspro/bin/cc | |||
dizzy:~> cc -V | |||
cc: Sun C 5.8 Patch 121015-06 2007/10/03 | |||
dizzy:~> which CC | |||
/opt/SUNWspro/bin/CC | |||
dizzy:~> CC -V | |||
CC: Sun C++ 5.8 Patch 121017-17 2008/11/12 | |||
dizzy:~> which f95 | |||
/opt/SUNWspro/bin/f95 | |||
dizzy:~> f95 -V | |||
f95: Sun Fortran 95 8.2 Patch 121019-10 2008/04/16 | |||
dizzy:~> uname -a | |||
SunOS dizzy 5.10 Generic_118833-03 sun4u sparc SUNW,Sun-Fire-V440 Solaris | |||
</nowiki></pre> | |||
This information must as minimum be provided when reporting build problems. | |||
== Reporting Problems == | |||
* report build or compilation errors of R to the '''R-devel''' mailing list not to R-help | |||
* before reporting an error you must download and try to build the latest '''R-patched''' from the R-homepage | |||
* add the output of the compiler including the error message | |||
Revision as of 13:39, 8 April 2009
Tips how to build R and Bioconductor using the SunPro 12 Compiler Suite
Synopsis
This pages gives some hints on how R and Boioconductor can be compiled using the Sun Compilers. This works at the CeBiTec. If you try that somwhere else your milage may vary. Most tips are given as shell commands.
Preconditions
Checking the versions of the compilers, yours should be same or higher:
dizzy~> which cc /opt/SUNWspro/bin/cc dizzy:~> cc -V cc: Sun C 5.8 Patch 121015-06 2007/10/03 dizzy:~> which CC /opt/SUNWspro/bin/CC dizzy:~> CC -V CC: Sun C++ 5.8 Patch 121017-17 2008/11/12 dizzy:~> which f95 /opt/SUNWspro/bin/f95 dizzy:~> f95 -V f95: Sun Fortran 95 8.2 Patch 121019-10 2008/04/16 dizzy:~> uname -a SunOS dizzy 5.10 Generic_118833-03 sun4u sparc SUNW,Sun-Fire-V440 Solaris
This information must as minimum be provided when reporting build problems.
Reporting Problems
- report build or compilation errors of R to the R-devel mailing list not to R-help
- before reporting an error you must download and try to build the latest R-patched from the R-homepage
- add the output of the compiler including the error message