OntologyDBWiki/DeveloperDocumentation/GettingStarted: Difference between revisions

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__NOTOC__
__NOTOC__
= Getting Started =
= Getting Started =
This HowTo explains briefly how to get started with developing code for OntoDB project.
== DB Access ==
All OntoDB projects are backed by the projectmanagement system [[GPMSWiki| GPMS]].
To be able to work with OntoDB you need an account.
If you are a developer
send an email to:  [[MailTo(ontodb AT cebitec DOT uni DASH bielefeld DOT de)]] to get a
developer account.
== CVS ==
* create a working direktory for CVS in your home named 'CVS'
* cd to that directory and get the projects needed to run OntoDB:
<pre><nowiki>
cvs checkout bioinfo/<name of project>
</nowiki></pre>
You need to checkout the following projects:
* ontodb
* projectmanagement
* common
* O2DBI
After having checked out everything, you should run the script
<pre><nowiki>
CVS/bioinfo/ontodb/bin/create_o2dbi_code.sh
</nowiki></pre>
This generates all the O2DBI classes from the configuration file <code><nowiki>CVS/bioinfo/ontodb/src/dbschema/OntoDB.xml</nowiki></code>. Please do '''not''' check this code into CVS unless you add some object methods to one of the classes. Generated code does not need to be in CVS as the configuration file is already in CVS.
== API Documentation ==
The API documentation of OntoDB is not checked in as this causes more trouble then it's worth. To generate your own copy of the API documentation, simply run the script
<pre><nowiki>
CVS/bioinfo/ontodb/bin/create_html_doc.sh
</nowiki></pre>


== Useful Documentation/Links ==
== Useful Documentation/Links ==
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* [http://librdf.org/docs/perl.html Redland Perl API]
* [http://librdf.org/docs/perl.html Redland Perl API]
* [http://librdf.org/docs/storage.html#mysql Information on using Redland with MySQL]
* [http://librdf.org/docs/storage.html#mysql Information on using Redland with MySQL]
* [http://www.w3.org/TR/owl-test/ OWL Web Ontology Language Test Cases]

Latest revision as of 14:28, 28 October 2011

Getting Started

This HowTo explains briefly how to get started with developing code for OntoDB project.

DB Access

All OntoDB projects are backed by the projectmanagement system GPMS. To be able to work with OntoDB you need an account.

If you are a developer send an email to: MailTo(ontodb AT cebitec DOT uni DASH bielefeld DOT de) to get a developer account.

CVS

  • create a working direktory for CVS in your home named 'CVS'
  • cd to that directory and get the projects needed to run OntoDB:
cvs checkout bioinfo/<name of project>

You need to checkout the following projects:

  • ontodb
  • projectmanagement
  • common
  • O2DBI

After having checked out everything, you should run the script

CVS/bioinfo/ontodb/bin/create_o2dbi_code.sh

This generates all the O2DBI classes from the configuration file CVS/bioinfo/ontodb/src/dbschema/OntoDB.xml. Please do not check this code into CVS unless you add some object methods to one of the classes. Generated code does not need to be in CVS as the configuration file is already in CVS.

API Documentation

The API documentation of OntoDB is not checked in as this causes more trouble then it's worth. To generate your own copy of the API documentation, simply run the script

CVS/bioinfo/ontodb/bin/create_html_doc.sh

Useful Documentation/Links