ProMeTraWiki/PrometraAccount: Difference between revisions

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__NOTOC__
__NOTOC__
= The public [[ProMeTra]] account =
= The public ProMeTra account =


== Access to the [[ProMeTra]] [[WebPage]] ==
== Access to the ProMeTra WebPage ==


We provide free access to the [[ProMeTra]] functionality via the public 'prometra' account.  
We provide free access to the ProMeTra functionality via the public 'prometra' account.
By clicking on the main [[ProMeTra]] logo at the login page, a session is generated and will be persistent.
By clicking on the main ProMeTra logo at the login page, a persistent ProMeTra session
is generated for your web browser with the public account.


Users may upload their own datasets in Excel or CSV format and use the existing pathways or genome maps to present their data.
[[File:PrometraAccount_login.png]]
The uploaded data is stored anonymously and will be deleted automatically after one hour.
This time period is on the one hand sufficient to present the data on various
pathway maps and ensures that the data.


Users may also contribute their own pathways which will then be made available via the [[ProMeTra]] interface.
Using this public login, users can already access public metabolomics and transcriptomics experiments stored in !Emma2 and !MeltDB.
Please have a look at the [[ProMeTraWiki/CebitecAccount|following page]] on how to use the web service access to these ''Omics'' platforms.


Please have a look at the [http://www.cebitec.uni-bielefeld.de/groups/brf/software/ "Software" website] for general information.
Apart from the direct Web Service access, users may also upload their own datasets in Excel or simple CSV format and
use the existing !Pathway- or GenomeMaps to visualize their data.
Every uploaded dataset is only stored temporaryli and will be deleted automatically after
the session is closed via the logout button.


* /TermsAndConcepts
Access to the uploaded experimental data is restricted to the active session.
** /ForUsers
This is sufficient to present the data on various
** /ForDevelopers
PathwayMaps and also ensures the privacy of the experimental datasets.


== Documentation ==
Whereas the datasets are only temporarily stored, uploaded PathwayMaps remain available.
* /CoreDocumentation (scripts documentation)
Researchers can even make their uploaded PathwayMaps available to colleagues by setting the ''public'' flag.
* /UserManual
** /WebDocumentation
** /GUIDocumentation
* /DeveloperDocumentation
** /GettingStarted
* /AdministratorDocumentation
** /SoftwareRequirements
** /HardwareRequirements
* /FAQs
* /HowTos


== General ==
[[File:PrometraAccount_upload.png]]
* /FeatureTable
* /FuturePlans


== Other Issues ==
A PathwayMap will by default only be visible in ProMeTra to the account user who uploaded the file.
By selecting an uploaded pathway map, appropriate actions to update, show or delete a map are provided in the left menu bar.


For more information about project setup, license, application examples, and publications, please go to the  [http://www.cebitec.uni-bielefeld.de/groups/brf/software/ "Software" website].
[[File:PrometraAccount_edit.png]]
 
== Contact ==
 
Please send an e-mail for account requests or questions concerning the use of "Software" to:
[[MailTo(software AT cebitec DOT uni DASH bielefeld DOT de)]]
 
For bug reports, please use our bug reporting system [http://bugs.cebitec.uni-bielefeld.de BugZilla].
 
Author: [http://www.cebitec.uni-bielefeld.de/~name]

Latest revision as of 10:05, 21 March 2012

The public ProMeTra account

Access to the ProMeTra WebPage

We provide free access to the ProMeTra functionality via the public 'prometra' account. By clicking on the main ProMeTra logo at the login page, a persistent ProMeTra session is generated for your web browser with the public account.

PrometraAccount login.png

Using this public login, users can already access public metabolomics and transcriptomics experiments stored in !Emma2 and !MeltDB. Please have a look at the following page on how to use the web service access to these Omics platforms.

Apart from the direct Web Service access, users may also upload their own datasets in Excel or simple CSV format and use the existing !Pathway- or GenomeMaps to visualize their data. Every uploaded dataset is only stored temporaryli and will be deleted automatically after the session is closed via the logout button.

Access to the uploaded experimental data is restricted to the active session. This is sufficient to present the data on various PathwayMaps and also ensures the privacy of the experimental datasets.

Whereas the datasets are only temporarily stored, uploaded PathwayMaps remain available. Researchers can even make their uploaded PathwayMaps available to colleagues by setting the public flag.

PrometraAccount upload.png

A PathwayMap will by default only be visible in ProMeTra to the account user who uploaded the file. By selecting an uploaded pathway map, appropriate actions to update, show or delete a map are provided in the left menu bar.

PrometraAccount edit.png