IGetDBWiki/RoadMap: Difference between revisions
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** easy selection of projects | ** easy selection of projects | ||
** possibly own page with direct selection of significance tests | ** possibly own page with direct selection of significance tests | ||
* BRF "look-and-feel" | |||
* Timestamps | |||
IGetDB 1.2: | IGetDB 1.2: | ||
* Change database schema from reverse star to snowflake including distance-tables for hierarchical data (e.g. sequence relations) | * Change database schema from reverse star to snowflake including distance-tables for hierarchical data (e.g. sequence relations) | ||
* Removal of | ** Better support for hierarchies (e.g. assembled 454 sequences) | ||
** Better support for external data (e.g. Gene-Ontology) | |||
* Removal of dependencies to BioMart | |||
* Create new tables for Mart configuration (opposed to the storage of an XML file as BLOB in the database). Possibly access via Hibernate | * Create new tables for Mart configuration (opposed to the storage of an XML file as BLOB in the database). Possibly access via Hibernate | ||
* Query-generation via | * Query-generation via FreeMarker templates | ||
* Separation of core and web-interface packages | * Separation of core and web-interface packages | ||
* Addition of pipeline system for analysis- and visualisation-tasks | * Addition of pipeline system for analysis- and visualisation-tasks | ||
* Use of dependency injection pattern (at the very least) for the web-interface. Candidates are Spring and Guice. | * Use of the dependency injection pattern (at the very least) for the web-interface. Candidates are Spring and Guice. | ||
* Addition of access control lists (ACL), | * Addition of access control lists (ACL), possibly by Acegi (acegi.sf.net) | ||
* Support of Pivot tables via Mondrian and JPivot | * Support of Pivot tables via Mondrian and JPivot | ||
* Support of report generation | * Support of report generation | ||
Latest revision as of 07:15, 26 October 2011
IGetDB 1.0:
- Known bugs should be removed (i.e. bugs with priority normal in bugzilla)
- GenDB/SAMS data importers must work via cronjobs
- EMMA data importer should work properly, that is:
- easy selection of projects
- possibly own page with direct selection of significance tests
- BRF "look-and-feel"
- Timestamps
IGetDB 1.2:
- Change database schema from reverse star to snowflake including distance-tables for hierarchical data (e.g. sequence relations)
- Better support for hierarchies (e.g. assembled 454 sequences)
- Better support for external data (e.g. Gene-Ontology)
- Removal of dependencies to BioMart
- Create new tables for Mart configuration (opposed to the storage of an XML file as BLOB in the database). Possibly access via Hibernate
- Query-generation via FreeMarker templates
- Separation of core and web-interface packages
- Addition of pipeline system for analysis- and visualisation-tasks
- Use of the dependency injection pattern (at the very least) for the web-interface. Candidates are Spring and Guice.
- Addition of access control lists (ACL), possibly by Acegi (acegi.sf.net)
- Support of Pivot tables via Mondrian and JPivot
- Support of report generation