ProMeTraWiki

ProMeTra - Multi-Omics Viewer

ProMeTra is a web based framework for the storage and visualization of user defined metabolic pathway maps and their visualization with experimental data from transcriptomics, genomics and proteomics.

Please also have a look at the ProMeTra website for general information.

Important information for users of Firefox 3

• Read this if you experience trouble accessing the ProMeTra login page with Firefox 3.

ProMeTra login page

• prometra.cebitec.uni-bielefeld.de

ProMeTra User Manual

Download the ProMeTra user manual which explains the main workflow of ProMeTra and how to create own pathway maps.

 Media:ProMeTraWiki$manual.pdf

ProMeTra Concepts

• [[ProMeTraWiki/PrometraAccount|Using the public ProMeTra] account]
• [[ProMeTraWiki/CebitecAccount|Using your CeBiTec], Bielefeld University account]
• [[ProMeTraWiki/GenomeMaps|What are the GenomeMaps] available via ProMeTra?]
• [[ProMeTraWiki/Animation|What exactly is the Animation feature of ProMeTra]?]
• Which methods are employed to colorize the pathway maps?

FAQs and How Tos

• What happens to my uploaded experimental data?
• Which software can I use to draw my own pathway maps?
• [[ProMeTraWiki/PathwayMap|How do I create my own PathwayMap] for ProMeTra?]
• [[ProMeTraWiki/PathwayMap|What features do my SVG pathway images need to be used in ProMeTra]?]
• Installing the Inkscape SVG Editor software
• Which web browsers do support the SVG image format?
• [[ProMeTraWiki/DownloadPathway|How can I download existing pathway maps from ProMeTra]?]
• How can I upload my own pathway maps?

Data formats

• Which format should the experimental data in my Excel files have?
• Which other data files can I upload?

Contact

Please send an e-mail for account requests or questions concerning the use of ProMeTra to: MailTo(prometra AT cebitec DOT uni DASH bielefeld DOT de)

For bug reports, please use our bug reporting system BugZilla.