Revision as of 10:58, 22 November 2004

GenDB Dependencies and Requirements

To install GenDB you need at least the following software installed on your Linux/UNIX system:

Perl >= 5.8.3 (please see the bundle file from the GenDB Project Web Pages)
BioPerl >= 1.4
Apache 2 (mod_perl_2, ...)
Sun Grid Engine >= 6.0
either a local sequence retrieval system or access to a remote system (e.g. SRS)
MySQL >= 3.x
BLAST, InterPRO, HMMer, GLIMMER

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