MeltDBWiki/HowTos: Difference between revisions

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Login to the public MeltDB project using the guest account:
Login to the public MeltDB project using the guest account:


Guest login
* [http://meltdb.cebitec.uni-bielefeld.de/cgi-bin/meltdb.cgi?login=guest&chksum=h/Zx4JEg6sz0I6hi97ZfsA&project=MeltDB_Public guest login]


To analyze the publicly available datasets in MeltDB, please  
To analyze the publicly available datasets in MeltDB, please  
select 'Browse/Analyse an existing Experiment' from the start page.
select 'Browse/Analyse an existing Experiment' from the start page.
[[Image:MeltDBWiki$$HowTos$startpage.png]];


Select the 'Three carbon sources' experiment by clicking  
Select the 'Three carbon sources' experiment by clicking  
on the folder icon to the left.
on the folder icon to the left.
[[Image:MeltDBWiki$$HowTos$experiments.png]];


The textual display of the experiment is presented and
The textual display of the experiment is presented and
a number of potential actions together with their shor descriptions
a number of potential actions together with their short descriptions
are listed below
are listed below.
 
[[Image:MeltDBWiki$$HowTos$carbon_sources.png]];
 
Please select 'Show PCA' to start the PCA analysis on the previously imported peaks
found by Xcalibur preprocessing methods.
 
Select all chromatograms and a list of metabolites and click
the 'Compute PCA' button. If you would like to log-transform the measured
and normalized metabolite values, mark the 'log' checkbox.


Select
[[Image:MeltDBWiki$$HowTos$pca.png]];

Revision as of 17:03, 3 April 2008

Using the public MeltDB experiments

Login to the public MeltDB project using the guest account:

To analyze the publicly available datasets in MeltDB, please select 'Browse/Analyse an existing Experiment' from the start page.

File:MeltDBWiki$$HowTos$startpage.png;

Select the 'Three carbon sources' experiment by clicking on the folder icon to the left.

MeltDBWiki$$HowTos$experiments.png;

The textual display of the experiment is presented and a number of potential actions together with their short descriptions are listed below.

MeltDBWiki$$HowTos$carbon sources.png;

Please select 'Show PCA' to start the PCA analysis on the previously imported peaks found by Xcalibur preprocessing methods.

Select all chromatograms and a list of metabolites and click the 'Compute PCA' button. If you would like to log-transform the measured and normalized metabolite values, mark the 'log' checkbox.

MeltDBWiki$$HowTos$pca.png;