EMMAWiki: Difference between revisions
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Center for Biotechnology, Bielefeld University | Center for Biotechnology, Bielefeld University | ||
Author: [http://www.cebitec.uni-bielefeld.de/~ | Author: [http://www.cebitec.uni-bielefeld.de/~mdondrup Michael Dondrup] |
Revision as of 10:24, 18 April 2005
EMMA 2 Overview Page
EMMA 2 - A MAGE-compliant system for storage and analysis of microarray data
EMMA 2 is a web-based system for management and analysis of transcriptomic data. EMMA 2 allows mapping of gene expression data onto proteome data or pathways and vice versa and provides extensible analysis and visualization Plug-Ins via the R-language. EMMA 2 now supports the MAGE-ML XML-language for the interchange of microarray data. With EMMA you can do normalization of single and multiple microarrays and afterwards run statistical test for inferring differrentially expressed genes and also run cluster analysis.
Please have a look at the EMMA website for general information.
- /TermsAndConcepts
- /ForUsers
- /ForDevelopers
Documentation
- /CoreDocumentation (Documentation of the main backend functionality and executable scripts)
- /UserManual (Documtation on the use of the web-interface)
- /WebDocumentation
- /DeveloperDocumentation
- /GettingStarted
- /AdministratorDocumentation (Installation, project configuration and account management)
- /SoftwareRequirements
- /HardwareRequirements
- /FAQs
- /HowTos
General
- /FeatureTable
- /FuturePlans
Other Issues
For more information about project setup, license, application examples, and publications, please go to the EMMA website.
- /SoftwareDisclaimer
Contact
Please send
- help requests to MailTo(emma AT cebitec DOT uni DASH bielefeld DOT de)
- bug-reports and feature requests to MailTo(emma DASH devel AT cebitec DOT uni DASH bielefeld DOT de) or use BugZilla
- account requests to MailTo(emma DASH support AT cebitec DOT uni DASH bielefeld DOT de)
/!\ Please never send passwords or other confidential information to mailing lists
Developers
- Michel Dondrup
- Alexander Goesman
- Stefan Albaum
- Thasso Griebel
- Tim Kahlke
- Felix Tille
[1] Cartoon by Daniel Koch, 2004
Copyright (C) 2004, Center for Biotechnology, Bielefeld University
Author: Michael Dondrup