ProMeTraWiki/CebitecAccount: Difference between revisions

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= [[ProMeTra]] and [[CeBiTec]] accounts =
= [[ProMeTra]] and [[CeBiTec]] accounts =


Users of CeBiTec software resources such as [http://www.cebitec.uni-bielefeld.de/groups/brf/software/gendb GenDB], [http://www.cebitec.uni-bielefeld.de/groups/brf/software/gendb  Emmma2], [http://prose.cebitec.uni-bielefeld.de ProSE] or [http://meltdb.cebitec.uni-bielefeld.de MeltDB] can use their existing accounts to access the ProMeTra interface. The advantage for them is
Users of CeBiTec software resources such as [http://www.cebitec.uni-bielefeld.de/groups/brf/software/gendb GenDB], [http://www.cebitec.uni-bielefeld.de/groups/brf/software/gendb  Emmma2], [http://prose.cebitec.uni-bielefeld.de ProSE] or [http://meltdb.cebitec.uni-bielefeld.de MeltDB] can use their existing accounts to access the ProMeTra interface. This hast th advantage that only a single login procedure has to take place and afterwards experimental  
that only a single login procedure has to take place and afterwards experimental  
data from the various ''Omics'' platforms of the [http://www.cebitec.uni-bielefeld.de/ CeBiTec] are made available via  
data from the various ''Omics'' platforms of the [http://www.cebitec.uni-bielefeld.de/ CeBiTec] are made available via  
structured data exchange and WebService technology.
data exchange by WebService technology.


  [[Image:ProMeTraWiki$$CebitecAccount$login.png]]
  [[Image:ProMeTraWiki$$CebitecAccount$login.png]]


The main interface of ProMeTra currently allows to access Emma2, ProSE and MeltDB and user will
The main interface of ProMeTra currently allows to access Emma2, ProSE and MeltDB and users will
see the experiments and datasets they already have access to in the individual applications.
see the experiments and datasets they already have access to in the individual applications.


  [[Image:ProMeTraWiki$$CebitecAccount$webservices.png]]
  [[Image:ProMeTraWiki$$CebitecAccount$webservices.png]]


The request to the datasets is done in a standard way and the user selects a project initially.
To request a dataset a user initially has to select a  
project.


  [[Image:ProMeTraWiki$$CebitecAccount$projects.png]]
  [[Image:ProMeTraWiki$$CebitecAccount$projects.png]]
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The groups or states that are selected in the last dialog will be compared to the  
The groups or states that are selected in the last dialog will be compared to the  
references and the resulting m-values will be used for the pathway or genome map visualizations.
references, and the resulting m-values will be used for the pathway or genome map visualizations.


  [[Image:ProMeTraWiki$$CebitecAccount$factors.png]]
  [[Image:ProMeTraWiki$$CebitecAccount$factors.png]]

Revision as of 15:02, 13 March 2009

ProMeTra and CeBiTec accounts

Users of CeBiTec software resources such as GenDB, Emmma2, ProSE or MeltDB can use their existing accounts to access the ProMeTra interface. This hast th advantage that only a single login procedure has to take place and afterwards experimental data from the various Omics platforms of the CeBiTec are made available via

data exchange by WebService technology.
File:ProMeTraWiki$$CebitecAccount$login.png

The main interface of ProMeTra currently allows to access Emma2, ProSE and MeltDB and users will see the experiments and datasets they already have access to in the individual applications.

File:ProMeTraWiki$$CebitecAccount$webservices.png

To request a dataset a user initially has to select a project.

File:ProMeTraWiki$$CebitecAccount$projects.png

For the given project all available experiments are listed and ...

File:ProMeTraWiki$$CebitecAccount$experiments.png

... a reference group or state can be selected afterwards.

File:ProMeTraWiki$$CebitecAccount$references.png

The groups or states that are selected in the last dialog will be compared to the references, and the resulting m-values will be used for the pathway or genome map visualizations.

File:ProMeTraWiki$$CebitecAccount$factors.png