GenDBWiki/AdministratorDocumentation

GenDB Administrator Documentation

As an alternative to using GenDB via the Internet at Bielefeld University, you can also download it and install it at your location. Please read the installation requirements, installing GenDB requires extensive resources and bioinformatics skills. GenDB 2.x has a web user interface (WebUI) for most user interactions. We recommend that annotation teams use that web interface. In addition to this interface GenDB also has a Gtk-1/Gnome-1 based graphical user interface (GUI) that has some added value, but is difficult to install.

• /DependenciesAndRequirements
• /UpdatingFromOlderVersions
• /Installation

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There is more stuff to be written! Here is just a list of topics:

- GenDB setup via Common Execution Environment (CEE)

- installation and configuration

 - Core

 - Apache

 - Gtk

- installing a GenDB patch/bugfix

- upgrading and update

- backup

- sequence db update

- DRMAA and scheduler issues