GenDBWiki/AdministratorDocumentation/DependenciesAndRequirements
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GenDB Dependencies and Requirements
To install GenDB you need at least the following software installed on your Linux/UNIX system:
- Perl >= 5.8.3 (please see the bundle file from the GenDB Project Web Pages)
- BioPerl >= 1.4
- Apache 2 (mod_perl_2, ...)
- Sun Grid Engine >= 6.0
- either a local sequence retrieval system or access to a remote system (e.g. SRS)
- MySQL >= 3.x
- BLAST, InterPRO, HMMer, GLIMMER