OntologyDBWiki/DeveloperDocumentation/ProjectsSpecification
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Specification Ontology Database
GPMS Information
project name
- ONTODB
project class
- ONTODB
project description
MetaXP is a search facility for expression data. It enables the user to quickly access experiments and their results by formulating queries such as "Give me all temperature-related stress experiments containing gene XY" or "Give me a list of all up-regulated genes in experiments on Xanthomonas campestris". MetaXP combines data from EMMA, GenDB and ProDB. The data is imported from each of these databases and processed for searchability. <http://intranet/bioinfo/MetaXP>
database name
ontodb_test
database description
Contains only test data. Do not try to use it for real research.
database DataSource_Type
MySQL 4.x
New Members
- Kai Runte (Chief)
Roles and Rights
Role | Description | Rights |
User | Denotes the average user. They can query the ontology database, but nothing else. | basic_access |
Maintainer | This person can import and export an ontology, but cannot create new ones. | basic_access, export, import, edit |
Developer | A developer has all the rights of a maintainer. Additionally (s)he should be able to alter a database structure. | basic_access, export, import, edit, modify_db |
Chief | A chief is responsible for adding/removing users to a project/ontology. | basic_access, export, import, edit, add_user |
Admin | An admin has basically all rights | basic_access, export, import, edit, add_user, modify_db |