MeltDBWiki: Difference between revisions

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Please also have a look at the [http://www.cebitec.uni-bielefeld.de/groups/brf/software/meltdb_info MeltDB website] for general information.
Please also have a look at the [http://www.cebitec.uni-bielefeld.de/groups/brf/software/meltdb_info MeltDB website] for general information.


== MeltDB Tutorials & [[HowTos]] ==
== Important information for users of Firefox 3 ==
 
* [[Firefox3|Read this if you experience trouble accessing the MeltDB login page with Firefox 3]].
 
== NEW: MeltDB ScreenCast Tutorials ==
 
* [https://meltdb.cebitec.uni-bielefeld.de/cgi-bin/tutorials.cgi Video tutorials for the MeltDB web interface].
 
== MeltDB Tutorials & HowTos ==


* [[MeltDBWiki/UploadChromas|Upload your chromatogram data in netCDF, mzXML or mzDATA format]].
* [[MeltDBWiki/UploadChromas|Upload your chromatogram data in netCDF, mzXML or mzDATA format]].
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* [[MeltDBWiki/ImportXcalibur|Upload your preprocessed results from Xcalibur]].
* [[MeltDBWiki/ImportXcalibur|Upload your preprocessed results from Xcalibur]].
* [[MeltDBWiki/ExperimentalFactors|Define your experimental factors according to the recommendations of the MSI]].
* [[MeltDBWiki/ExperimentalFactors|Define your experimental factors according to the recommendations of the MSI]].
* [[MeltDBWiki/PerformFBCA|Perform chromatogram alignments using the star like feature based approach of MeltDB.]].
* [[MeltDBWiki/PeakDetection|Detect peaks in your chromatograms using MeltDB.]].
* [[MeltDBWiki/RIManual|NEW: Annotate Retention Indices manually.]].
* [[MeltDBWiki/DatabaseSearch|Search in MS databases and generate Observations for your Peaks.]].
* [[MeltDBWiki/Profiling|Perform the MeltDB profiling analysis.]].
* [[MeltDBWiki/HowTos|Run PCA analysis on sample experiment]].
* [[MeltDBWiki/HowTos|Run PCA analysis on sample experiment]].
* [[MeltDBWiki/ConvertingCDF|Converting Thermo Finnigan RAW files to netCDF format]]


== MeltDB Sample Scripts ==
== MeltDB Sample Scripts ==
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== Documentation ==
== Documentation ==
* [http://meltdb.cebitec.uni-bielefeld.de/doc/index.html Core API].
* [http://meltdb.cebitec.uni-bielefeld.de/doc/index.html Core API]
* [[MeltDBWiki/ClassDiagram|The MeltDB class hierarchy]]


== MeltDB login page ==
== MeltDB login page ==
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== Misc ==
== Misc ==
* [[MeltDBWiki/RoundingMZ|Rounding m/z values]]
* [[MeltDBWiki/RoundingMZ|Rounding m/z values]]
* [[MeltDBWiki/ConvertingCDF|Converting Thermo Finnigan RAW files to netCDF format]]


== Contact ==
== Contact ==
Please send an e-mail for account requests or questions concerning the use of MeltDB to:
Please send an e-mail for account requests or questions concerning the use of MeltDB to:
[[MailTo(meltdb AT cebitec DOT uni DASH bielefeld DOT de)]]
meltdb[AT]CeBiTec[DOT]Uni-Bielefeld[DOT]de


For bug reports, please use our bug reporting system [http://bugs.cebitec.uni-bielefeld.de BugZilla].
For bug reports, please use our bug reporting system [http://bugs.cebitec.uni-bielefeld.de BugZilla].

Latest revision as of 16:28, 31 October 2011

MeltDB - Metabolomics Software Platform

MeltDB is a web based framework for the storage, analysis and visualization of metabolomic datasests and their integration with experimental data from transcriptomics, genomics and proteomics.

Please also have a look at the MeltDB website for general information.

Important information for users of Firefox 3

NEW: MeltDB ScreenCast Tutorials

MeltDB Tutorials & HowTos

MeltDB Sample Scripts

Documentation

MeltDB login page

Misc

Contact

Please send an e-mail for account requests or questions concerning the use of MeltDB to: meltdb[AT]CeBiTec[DOT]Uni-Bielefeld[DOT]de

For bug reports, please use our bug reporting system BugZilla.